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Taxonomy upload from EOL sources

Scratchpads Issue Queue - Thu, 05/17/2012 - 22:08

When uploading the taxonomy of Anolis from The Reptile Database, scratchpads is reading each synonym of each species as a separate species, so it's creating a species level node for each synonym on the resulting taxonomy tree. Also it is importing every entry twice (in total there are 385 species of Anolis in The Reptile Database, but scratchpads is importing 5205 taxa!). http://sandbox.scratchpads.eu/taxonomy/term/8#overlay=admin/structure/ta...

EOL content as separate objects

Scratchpads Issue Queue - Thu, 05/17/2012 - 21:41

Is it possible to harvest the EOL content as independent objects? so they can be easily hidden or organized individually (instead of having a single block of EOL content).

Taxonomy: Improve layout of added fields

Scratchpads Issue Queue - Thu, 05/17/2012 - 11:02

Improve the layout for newly added fields in the nomenclature block on taxon pages. Especially text area fields don't look good, see http://myrcia.myspecies.info/myrcia-sl/marlierea-bipennis.

Rise of the coyote: The new top dog

News from Nature - Thu, 05/17/2012 - 04:38

Rise of the coyote: The new top dog

Nature 485, 7398 (2012). http://www.nature.com/doifinder/10.1038/485296a

Author: Sharon Levy

Shape-shifting coyotes have evolved to take advantage of a landscape transformed by people. Scientists are now discovering just how wily the creatures are.

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Replication studies: Bad copy

News from Nature - Thu, 05/17/2012 - 04:38

Replication studies: Bad copy

Nature 485, 7398 (2012). http://www.nature.com/doifinder/10.1038/485298a

Author: Ed Yong

In the wake of high-profile controversies, psychologists are facing up to problems with replication.

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Correction

News from Nature - Thu, 05/17/2012 - 04:38

Correction

Nature 485, 7398 (2012). http://www.nature.com/doifinder/10.1038/485295b

In the Editorial 'Price of freedom' (Nature485, 148; 2012), we stated that 'plenty of European scientists will be lost'. 'European scientists' should have been 'Europan science', as we meant to refer to science on the Jovian moon Europa.

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Change search default to Taxonomy?

Scratchpads Issue Queue - Wed, 05/16/2012 - 14:09

Is it possible to change the default search type to Taxonomy rather than Simple on my scratchpad (Nannotax)? This is something that users have requested from me and it would make sense.
thanks Jeremy

Misplaced childhood

News from Nature - Wed, 05/16/2012 - 00:00

Misplaced childhood

Nature 485, 7398 (2012). doi:10.1038/485279a

The US National Institutes of Health should rethink plans to limit a nationwide study of children. It must not miss a rare opportunity to probe the causes of childhood diseases.

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Needless conflict

News from Nature - Wed, 05/16/2012 - 00:00

Needless conflict

Nature 485, 7398 (2012). doi:10.1038/485279b

Independent experts should be kept from undue suspicion as well as undue influence.

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Honest opinions

News from Nature - Wed, 05/16/2012 - 00:00

Honest opinions

Nature 485, 7398 (2012). doi:10.1038/485280a

Proposals for a UK law on defamation highlight the power of scientific protest.

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Reach out to defend evolution

News from Nature - Wed, 05/16/2012 - 00:00

Reach out to defend evolution

Nature 485, 7398 (2012). http://www.nature.com/doifinder/10.1038/485281a

Author: Russell Garwood

Creationists seize on any perceived gaps in our knowledge of evolutionary processes. But scientists can and should fight back, says Russell Garwood.

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Planetary science: Planet-like asteroid

News from Nature - Wed, 05/16/2012 - 00:00

Planetary science: Planet-like asteroid

Nature 485, 7398 (2012). doi:10.1038/485282a

The giant asteroid Vesta resembles a planet more than it does other asteroids, according to Christopher Russell at the University of California, Los Angeles, and his colleagues. In six separate studies, the researchers report their analysis of data from NASA's Dawn spacecraft, which has been

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Cancer: Environment of chemo success

News from Nature - Wed, 05/16/2012 - 00:00

Cancer: Environment of chemo success

Nature 485, 7398 (2012). doi:10.1038/485282b

A tumour's response to chemotherapy is shaped by interactions between the tumour and its microenvironment.Mikala Egeblad at Cold Spring Harbor Laboratory in New York and her colleagues used in vivo microscopy to monitor tumours' responses to the chemotherapy drug doxorubicin in mice. They

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Environmental health: Less biodiversity, more allergies

News from Nature - Wed, 05/16/2012 - 00:00

Environmental health: Less biodiversity, more allergies

Nature 485, 7398 (2012). doi:10.1038/485282c

A decrease in the amount of time spent in contact with the natural environment and changes in the population of microbes resident on the skin could be contributing to the increase in inflammatory disorders such as allergies.To test these ideas, Ilkka Hanski at the

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Neuroscience: Anti-seizure drug boosts memory

News from Nature - Wed, 05/16/2012 - 00:00

Neuroscience: Anti-seizure drug boosts memory

Nature 485, 7398 (2012). doi:10.1038/485282d

One way to improve memory in people with a disorder that can precede Alzheimer's disease is to dampen activity in a part of the brain known as the hippocampus, rather than to boost it as previously thought.Michela Gallagher at Johns Hopkins University in Baltimore,

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Biomaterials: High-voltage plant proteins

News from Nature - Wed, 05/16/2012 - 00:00

Biomaterials: High-voltage plant proteins

Nature 485, 7398 (2012). doi:10.1038/485282e

Crystals of photosynthetic protein complexes extracted from plant cells can generate extraordinarily high voltages when placed on a conducting surface and stimulated by light.Each of the light-transducing complexes known as photosystem I can generate about 1 volt during photosynthesis in the plant. Nathan Nelson

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Photonics: Solar panel in the eye

News from Nature - Wed, 05/16/2012 - 00:00

Photonics: Solar panel in the eye

Nature 485, 7398 (2012). doi:10.1038/485283a

Special glasses that fire near-infrared signals onto a device implanted into the retina could one day help to restore vision in blind people. This system would require fewer implanted components such as wires and coils to power the device than other proposed retinal prostheses.James

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Astronomy: Exoplanet signals ring true

News from Nature - Wed, 05/16/2012 - 00:00

Astronomy: Exoplanet signals ring true

Nature 485, 7398 (2012). doi:10.1038/485283b

Most candidate multi-planet systems spotted by the Kepler space telescope probably contain true exoplanets, according to a statistical analysis.Kepler spots potential planets beyond our Solar System by looking for tiny dips in brightness as the planets pass in front of their host stars. The

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Anthropology: Ancient Mayan wall calendar

News from Nature - Wed, 05/16/2012 - 00:00

Anthropology: Ancient Mayan wall calendar

Nature 485, 7398 (2012). doi:10.1038/485283c

In an underground chamber in Guatemala, archaeologists have discovered the earliest evidence so far of Mayan astronomical tables: dates, numbers and depictions of lunar deities painted or carved on the walls some 1,200 years ago.William Saturno at Boston University in Massachusetts and his colleagues

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Neuroscience: The neural core of consciousness

News from Nature - Wed, 05/16/2012 - 00:00

Neuroscience: The neural core of consciousness

Nature 485, 7398 (2012). doi:10.1038/485283d

Highly read on www.jneurosci.org in April'Waking up' from an unconscious state requires the activation of only primitive areas deep in the brain — not the higher cortical areas indicated in previous studies on anaesthetized people.Harry Scheinin at the University of Turku in

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